Inverted patterns of genetic diversity in continental and island populations of the heather Erica scoparia s.l.

Aim Using the heather Erica scoparia s.l. as a model, this paper aims to test theoretical predictions that island populations are genetically less diverse than continental ones and to determine the extent to which island and continental populations are connected by pollen‐ and seed‐mediated gene flow. Location Macaronesia, Mediterranean, Atlantic fringe of Europe. Methods Patterns of genetic diversity are described based on variation at two chloroplast DNA (cpDNA) loci and one nuclear DNA (nDNA) locus for 109 accessions across the entire distribution range of the species. Global patterns of genetic differentiation were investigated using principal coordinates analysis. Genetic differentiation between island and continental areas, estimations of pollen‐ and seed‐mediated gene flow, and the presence of phylogeographical signal were assessed by means of F_st /N_ST (continental scale) and F_ij/N_ij (local scale). Extant and past distribution ranges of the species were inferred from niche modelling using layers describing present and Last Glacial Maximum (LGM) macroclimatic conditions. Results The Azores exhibited a significantly higher genetic diversity than the continent. The lowest levels of genetic differentiation were observed between the Azores and the western Mediterranean, and the diversity observed in the Azores resulted from at least two colonization waves. Within the Azores, kinship coefficients showed a significant and much steeper decrease with geographical distance in the cpDNA than in the nDNA. The distribution predicted by LGM models was markedly different from the current potential distribution, particularly in western Europe, where no suitable areas were predicted by LGM models, and along the Atlantic coast of the African continent, where LGM models predicted highly suitable climatic conditions. Main conclusions The higher diversity observed in Azorean than in continental populations is inconsistent with MacArthur and Wilson’s equilibrium model and derived theoretical population genetic expectations. This inverted pattern may be the result of extinction on the continent coupled with multiple island colonization events and subsequent allopatric diversification and lineage hybridization in the Azores. The results highlight the role of allopatric diversification in explaining diversification on islands and suggest that this process has played a much more significant role in shaping Azorean biodiversity than previously thought.     

Critical examination of postulated cladistic relationships among species of flour beetles (genus Tribolium,Tenebrionidae, Coleoptera)

Cytological considerations have led to the hypothesis that Tribolium confusum (CF) evolved from an ancestor similar to T. castaneum (CS) by translocation of an autosome to the X chromsome, and that T. destructor (DEST) was derived from CF. T. brevicornis (BREV) is regarded as the most primitive on morphological grounds. Electrophoretic analyses of 19 strains of CS, 7 of CF, and 1 each of DEST and BREV do not support this postulated evolutionary pathway. CF and CS are much more similar to BREV than they are to each other. (Comparisons of morphological mutations in CS and CF also indicate that the two species are not similar genetically.) DEST and CF are very dissimilar electrophoretically. It is likely that the species evolved independently from an ancestral stock which may be represented by BREV. Recognition of gene homology in different species is the keystone for all attempts at constructing genetically meaningful evolutionary pathways. The difficulties involved in doing so are pointed out.     

Effects of forced migrations on spatial and temporal changes in genetic structure of two local populations in Bosnia

Ten qualitative traits were observed in two isolated human populations in Bosnia for prewar and postwar periods. Due to recent war in Bosnia and Herzegovina two million citizens was forced to migrate. Dramatic migration effects occurred in the investigated populations. Population characteristics found were geographic isolation, high levels of marital distance “zero”, patrilocality and propagation isolation. Relative recessive allele frequencies of ten qualitative traits were calculated. Average heterozigosity, genetic differentiation, total heterozigosity, within populations heterozigosity, genetic distance and relative measures based on results of genetic distance analysis were observed. The total number of observed individuals was 1875. We have observed 1209 individuals in prewar period (Bijela population 731 and Memici population 478) and 666 individuals in the postwar period (Bijela population 248 and Memici population 478). Results ofFst andGst analysis showed changed degree of genetic differentiation across observed loci. Significant changes in differentiation were recorded for crooked little finger and PTC tasting. Modest changes of gene differentiation were recorded for ear lobe type and thumb proximal extensibility. Genetic distance analisis between Bijela and Memici has lower value after then before the war, but genetic distance between Bijela-prewar and Bijela-postwar has higher value, as well as Memici-prewar and Memici-postwar genetic distance. Genetic distance between Bijela-prewar and Memiciprewar, as well as Bijela-postwar and Memici-postwar showed similarity. Constructed dendrogram based on results of genetic distance analyses indicated two clusters groups (1. Bijela-prewar, Memici-prewar; 2. Bijela-postwar, Memici-postwar). Changed genetic differentiation and results of genetic distance analyses indicated possibility of significant impact of forced migration in genetic structure of observed populations.     

东方田鼠种群扩散及活动对外部因子的反应格局

在野外围栏条件下,采用2×2×2析因实验,测定外部因子食物、捕食,以及同域分布物种黑线姬鼠的种间竞争对东方田鼠扩散和活动距离的独立作用及其交互作用的效应。研究结果表明,在所有的扩散个体中,幼体扩散的比例为71.0%。雄体扩散的比例为80.5%。东方田鼠扩散的趋势与其种群密度及补充量的变动一致。食物对扩散具有显著独立作用;捕食对扩散的作用接近显著;种间竞争对扩散的直接效应不显著;食物、捕食与种间竞争交互作用对扩散的效应亦不显著。在诱捕期内雄性的长距离活动比例及其诱捕期间长距离活动比例均显著大于诱捕期内雌性及其诱捕期间的长距离活动比例。不同处理种群间,仅雄体在诱捕期间的长距离活动比例具有显著差异;食物对雄体的长距离活动具有直接和间接(通过密度)的效应;而预防捕食者和竞争物种对不同处理种群雄体的长距离活动则无一致的效应。     

遗传距离的错误观点和病毒进化踪迹的探索

通过对病毒基因序列的遗传距离(K)的演算,发现公式中的p和q应理解为转换率和颠换率;计算所得的K值是一个百分率,更适合于显示生物进化的时间概念。因此建议将遗传距离改名为进化率。并从进化率计算中的规律性变化,探索了病毒进化的信息。     

堰蜒逃逸行为的影响因子

通过野外和室内实试检测蝘蜒逃逸行为的影响因子。野外研究显示,蝘蜒可接近距离与隐蔽所间距呈显著正相关。与动物体温和基底温度无关;在开阔生境中,成体和幼体的可接近距离相似．而郁闭生境中成体的可接近距离显著大于幼体。室内试验表明。两性蝘蜒的可接近距离差异显著,繁殖期雌体的可接近距离大于雄体。     

水稻亚种间杂种F1光合特性研究

用绵恢725、蜀恢527和蜀恢881三个籼型恢复系、1个美国稻Lemont和1个爪哇稻香大粒作母本,与1个日本特早熟粳稻Kitaake杂交,研究了5个杂种F1及其亲本的光合生理表现.结果表明,在高光通量密度(Photosynthetic flux density,PFD)条件下,5个杂种F1净光合速率(Pn)明显高于双亲或双亲之一,推测亲本与杂种F1之间不同的Pn同叶片中Rubsico活性有关.杂种F1的比较中,在表观量子效率(ψ)、羧化效率(CE)、CO2补偿点(T)等方面,籼粳亚种间杂种F1(绵恢725/Kitaake、蜀恢527/Kitaake、蜀恢881/Kitaake)对2个亚种内杂种F1香大粒/Kitaake(粳爪交)、Lemont/Kitaake(不同生态型的粳粳交,美国稻属于特殊粳稻)具有明显的优势,而蜀恢881含有粳型血缘,蜀恢881/Kitaake也比典型籼粳亚种间杂种F1绵恢725/Kitaake、蜀恢527/Kitaake优势稍逊一筹.5个杂种F1因为具有不同的遗传差异而表现出不同的光合优势,在这方面,典型籼粳亚种间杂交蜀恢527/Kitaake、绵恢725/Kitaake要优于其他杂交种,说明亲本间遗传差异越大,其杂种F1的光合优势越强.     

人为干扰对黑腹滨鹬觅食行为的影响

2003年11月至2004年3月,采用目标动物取样法和人为干扰实验法,于浙江省乐清湾滩涂进行人类活动对黑腹滨鹬(Calidrisalpina)觅食行为影响的研究。取样观察结果表明,在每天沿海堤可观察黑腹滨鹬持续觅食的1h里,96.6%的黑腹滨鹬在35m或更小的距离上通过奔跑或惊飞对人类的活动作出反应;黑腹滨鹬花费90%(人类较多的盐盆滩涂为85%,较少的乐成滩涂为94%)的时间觅食,10%的时间用于避免人类的干扰;人数、人类活动类型对觅食时间具有显著影响,人数、人离黑腹滨鹬的距离、人类活动类型对黑腹滨鹬移动的距离、移动的次数以及黑腹滨鹬对人类靠近的反应均具有显著效应。人为干扰最小接近距离实验结果表明,黑腹滨鹬对人类反应的距离在3～30m;干扰人数为1人时的最小接近距离显著大于2人;人类行走和奔跑的两种活动类型对黑腹滨鹬的最小接近距离没有显著影响。本研究验证了滨鸟觅食区内的人为活动严重影响黑腹滨鹬觅食行为的假设。     

Spatial variation in species diversity and composition of flea assemblages in small mammalian hosts: geographical distance or faunal similarity?

Aim Spatial variation in the diversity of fleas parasitic on small mammals was examined to answer three questions. (1) Is the diversity of flea assemblages repeatable among populations of the same host species? (2) Does similarity in the composition of flea assemblages among populations of the same host species decay with geographical distance, with decreasing similarity in the composition of local host faunas, or with both? (3) Does the diversity of flea assemblages correlate with climatic variables? Location The study used previously published data on 69 species of small mammals and their fleas from 24 different regions of the Holarctic. Methods The diversity of flea assemblages was measured as both species richness and the average taxonomic distinctness of their component species. Similarity between flea assemblages was measured using both the Jaccard and Morisita–Horn indices, whereas similarity in the composition of host faunas between regions (host ‘faunal’ distance) was quantified using the Jaccard index. Where appropriate, a correction was made for the potentially confounding influence of phylogeny using the independent contrasts method. Results Flea species richness varied less within than among host species, and is thus a repeatable host species character; the same was not true of the taxonomic distinctness of flea assemblages. In almost all host species found in at least five regions, similarity in flea assemblages decreased with increases in either or both geographical and faunal distance. In most host species, the diversity of flea assemblages correlated with one or more climatic variable, in particular mean winter temperature. Main conclusions Spatial variation in flea diversity among populations of the same mammal species is constrained by the fact that it appears to be a species character, but is also driven by local climatic conditions. The results highlight how ecological processes interact with co‐evolutionary history to determine local parasite biodiversity.     

Kolmogorov complexity of epithelial pattern formation: The role of regulatory network configuration

The tissues of multicellular organisms are made of differentiated cells arranged in organized patterns. This organization emerges during development from the coupling of dynamic intra- and intercellular regulatory networks. This work applies the methods of information theory to understand how regulatory network structure both within and between cells relates to the complexity of spatial patterns that emerge as a consequence of network operation. A computational study was performed in which undifferentiated cells were arranged in a two dimensional lattice, with gene expression in each cell regulated by identical intracellular randomly generated Boolean networks. Cell–cell contact signalling between embryonic cells is modeled as coupling among intracellular networks so that gene expression in one cell can influence the expression of genes in adjacent cells. In this system, the initially identical cells differentiate and form patterns of different cell types. The complexity of network structure, temporal dynamics and spatial organization is quantified through the Kolmogorov-based measures of normalized compression distance and set complexity. Results over sets of random networks that operate in the ordered, critical and chaotic domains demonstrate that: (1) ordered and critical networks tend to create the most information-rich patterns; (2) signalling configurations in which cell-to-cell communication is non-directional mostly produce simple patterns irrespective of the internal network domain; and (3) directional signalling configurations, similar to those that function in planar cell polarity, produce the most complex patterns, but only when the intracellular networks function in non-chaotic domains.